EnhancerDB
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  3. rs553028828[chr1:52089957]
Enhancers that have rs553028828[chr1:52089957]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52082245 52099655 enh11847
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs553028828[chr1:52089957]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52089942 52089963 IRF1 JASPAR yes 28855518
chr1 52089956 52089967 DMRT3 JASPAR yes 28855519
Genes associated with rs553028828[chr1:52089957], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More