EnhancerDB
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  3. rs553065365[chr17:80494723]
Enhancers that have rs553065365[chr17:80494723]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553065365[chr17:80494723]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80491797 80495137 TCF7L2 GTRD no Colon (HCT116) 21800723
chr17 80491797 80495137 TCF7L2 GTRD no Colon (HCT116) 108312679
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 21800724
chr17 80491845 80495445 TCF7L2 GTRD no Colon (HCT116) 108312680
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 21800725
chr17 80493363 80495370 TCF7L2 GTRD no Colon (HCT116) 108312681
chr17 80493974 80494892 ZNF274 GTRD no Cervix (HeLa-S3) 21800727
chr17 80493974 80494892 ZNF274 GTRD no Cervix (HeLa-S3) 108312683
chr17 80494160 80494834 ZBTB33 GTRD no Lung (A549) 21800731
chr17 80494160 80494834 ZBTB33 GTRD no Lung (A549) 108312687
chr17 80494214 80494950 ZNF274 GTRD no Bone Marrow (K562) 21800732
chr17 80494214 80494950 ZNF274 GTRD no Bone Marrow (K562) 108312688
chr17 80494720 80494735 TFAP2A JASPAR yes 56371798
chr17 80494720 80494735 TFAP2C JASPAR yes 56371799
chr17 80494722 80494728 NFE2 TRANSFAC yes 56371800
chr17 80494722 80494734 INSM1 JASPAR yes 56371801
chr17 80494723 80494734 TFAP2A JASPAR yes 56371802
chr17 80494723 80494734 TFAP2B JASPAR yes 56371803
chr17 80494723 80494734 TFAP2C JASPAR yes 56371804
Genes associated with rs553065365[chr17:80494723], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More