EnhancerDB
  1. Home
  2. SNP
  3. rs553091360[chr2:232538268]
Enhancers that have rs553091360[chr2:232538268]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553091360[chr2:232538268]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435737
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435738
chr2 232535800 232538649 POLR2A UCSC Txn Factor no Conserved 108435739
chr2 232538267 232538278 ELK4 JASPAR yes 81734807
chr2 232538267 232538278 FLI1 JASPAR yes 81734808
chr2 232538268 232538278 ERF JASPAR yes 81734809
chr2 232538268 232538278 ETS1 JASPAR yes 81734810
chr2 232538268 232538278 ETV6 JASPAR yes 81734811
chr2 232538268 232538278 GABPA JASPAR yes 81734812
chr2 232538268 232538281 ELF1 JASPAR yes 81734813
Genes associated with rs553091360[chr2:232538268], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More