EnhancerDB
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Enhancers that have rs553104989[chr12:110705161]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 110698345 110711799 enh29982
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 110704832 110705217 vista14871
VISTA
Transcript factors that have rs553104989[chr12:110705161]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 110704252 110705403 ZNF274 GTRD no Cervix (HeLa-S3) 21573052
chr12 110704252 110705403 ZNF274 GTRD no Cervix (HeLa-S3) 108058961
chr12 110704407 110705475 ZBTB33 GTRD no Lung (A549) 108058962
chr12 110704449 110705316 ZNF274 GTRD no Blood (GM12878) 108058964
chr12 110704458 110705512 ZBTB33 GTRD no Lung (A549) 108058966
chr12 110704496 110705400 ZNF274 GTRD no Bone Marrow (K562) 21573061
chr12 110704496 110705400 ZNF274 GTRD no Bone Marrow (K562) 108058968
chr12 110704507 110705400 ZNF274 GTRD no Bone Marrow (K562) 21573062
chr12 110704507 110705400 ZNF274 GTRD no Bone Marrow (K562) 108058969
chr12 110704508 110705341 ZNF143 GTRD no Epithelial (MCF-7) 21573063
chr12 110704508 110705341 ZNF143 GTRD no Epithelial (MCF-7) 108058970
chr12 110704515 110705164 ZNF274 GTRD no Bone Marrow (K562) 21573065
chr12 110704515 110705164 ZNF274 GTRD no Bone Marrow (K562) 108058972
chr12 110704546 110705284 ZBTB33 GTRD no Lung (A549) 108058973
chr12 110704547 110705193 ZNF274 GTRD no Liver (HepG2) 21573066
chr12 110704547 110705193 ZNF274 GTRD no Liver (HepG2) 108058974
chr12 110704579 110705379 ZNF143 GTRD no Epithelial (MCF-7) 21573069
chr12 110704579 110705379 ZNF143 GTRD no Epithelial (MCF-7) 108058977
chr12 110704581 110705916 ZNF274 GTRD no Liver (HepG2) 21573070
chr12 110704581 110705916 ZNF274 GTRD no Liver (HepG2) 108058979
chr12 110704591 110705243 ZNF143 GTRD no Epithelial (MCF-7) 21573071
chr12 110704591 110705243 ZNF143 GTRD no Epithelial (MCF-7) 108058980
chr12 110704597 110705198 ZNF143 GTRD no Epithelial (MCF-7) 21573072
chr12 110704597 110705198 ZNF143 GTRD no Epithelial (MCF-7) 108058981
chr12 110704607 110705166 ZNF274 GTRD no Bone Marrow (K562) 21573074
chr12 110704607 110705166 ZNF274 GTRD no Bone Marrow (K562) 108058983
chr12 110704623 110705319 ZBTB33 GTRD no Lung (A549) 108058986
chr12 110704634 110705164 ZNF274 GTRD no Liver (HepG2) 21573077
chr12 110704634 110705164 ZNF274 GTRD no Liver (HepG2) 108058987
chr12 110704647 110706003 ZNF274 GTRD no Liver (HepG2) 21573079
chr12 110704647 110706003 ZNF274 GTRD no Liver (HepG2) 108058989
chr12 110704659 110705187 ZNF274 GTRD no Liver (HepG2) 21573080
chr12 110704659 110705187 ZNF274 GTRD no Liver (HepG2) 108058990
chr12 110704659 110705231 ZBTB33 GTRD no Lung (A549) 108058991
chr12 110704678 110705207 ZNF274 GTRD no Liver (HepG2) 21573084
chr12 110704678 110705207 ZNF274 GTRD no Liver (HepG2) 108058995
chr12 110704685 110705261 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108059000
chr12 110704687 110705194 ZNF274 GTRD no Liver (HepG2) 21573088
chr12 110704687 110705194 ZNF274 GTRD no Liver (HepG2) 108059002
chr12 110704692 110705308 ZNF143 GTRD no Epithelial (MCF-7) 21573090
chr12 110704692 110705308 ZNF143 GTRD no Epithelial (MCF-7) 108059004
chr12 110704697 110705161 ZNF274 GTRD no Liver (HepG2) 21573092
chr12 110704697 110705161 ZNF274 GTRD no Liver (HepG2) 108059007
chr12 110704709 110705187 ZNF274 GTRD no Bone Marrow (K562) 21573097
chr12 110704709 110705187 ZNF274 GTRD no Bone Marrow (K562) 108059012
chr12 110704716 110705172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21573099
chr12 110704716 110705172 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108059014
chr12 110704721 110705204 ZNF274 GTRD no Bone Marrow (K562) 21573100
chr12 110704721 110705204 ZNF274 GTRD no Bone Marrow (K562) 108059015
chr12 110704731 110705263 ZNF274 GTRD no Blood (GM12878) 108059022
chr12 110704741 110705281 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108059024
chr12 110704764 110705225 ZNF143 GTRD no Epithelial (MCF-7) 21573108
chr12 110704764 110705225 ZNF143 GTRD no Epithelial (MCF-7) 108059031
chr12 110704777 110705249 ZBTB33 GTRD no Lung (A549) 108059032
chr12 110704815 110705465 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21573111
chr12 110704815 110705465 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108059036
chr12 110704853 110705329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21573115
chr12 110704853 110705329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108059040
chr12 110704971 110705427 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21573116
chr12 110704971 110705427 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108059041
chr12 110705025 110705469 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21573117
chr12 110705025 110705469 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108059042
chr12 110705030 110705420 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21573118
chr12 110705030 110705420 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108059043
chr12 110705030 110705723 TEF1 GTRD no Bone (Osteoblast) 21573119
chr12 110705030 110705723 TEF1 GTRD no Bone (Osteoblast) 108059044
chr12 110705031 110705427 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21573120
chr12 110705031 110705427 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108059045
chr12 110705102 110705362 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21573121
chr12 110705102 110705362 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108059046
chr12 110705113 110705463 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108059047
chr12 110705141 110705397 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21573122
chr12 110705141 110705397 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108059048
Genes associated with rs553104989[chr12:110705161], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More