EnhancerDB
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  3. rs553160263[chr17:42180014]
Enhancers that have rs553160263[chr17:42180014]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553160263[chr17:42180014]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42180009 42180021 BHLHE23 JASPAR yes 54387417
chr17 42180010 42180020 BHLHE22 JASPAR yes 54387418
chr17 42180010 42180020 NEUROD2 JASPAR yes 54387419
chr17 42180010 42180020 NEUROG2 JASPAR yes 54387420
chr17 42180010 42180020 OLIG1 JASPAR yes 54387421
chr17 42180010 42180020 OLIG2 JASPAR yes 54387422
chr17 42180010 42180020 OLIG3 JASPAR yes 54387423
chr17 42180012 42180030 TP53 JASPAR yes 54387424
chr17 42180013 42180033 TP53 JASPAR yes 54387425
Genes associated with rs553160263[chr17:42180014], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More