EnhancerDB
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  3. rs553206427[chr1:24627672]
Enhancers that have rs553206427[chr1:24627672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24599645 24630859 enh11619
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553206427[chr1:24627672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24627667 24627682 SCRT1 JASPAR yes 27498392
chr1 24627669 24627682 SCRT2 JASPAR yes 27498393
Genes associated with rs553206427[chr1:24627672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More