EnhancerDB
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  3. rs553212524[chr5:79479266]
Enhancers that have rs553212524[chr5:79479266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553212524[chr5:79479266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79479257 79479271 SPI1 JASPAR yes 63703020
chr5 79479258 79479271 ELF1 JASPAR yes 63703021
chr5 79479259 79479271 EHF JASPAR yes 63703022
chr5 79479259 79479271 ELF1 JASPAR yes 63703023
chr5 79479259 79479271 ELF4 JASPAR yes 63703024
chr5 79479259 79479272 ELF3 JASPAR yes 63703025
chr5 79479260 79479271 ELF5 JASPAR yes 63703026
chr5 79479260 79479271 ETV2 JASPAR yes 63703027
chr5 79479261 79479271 ELK1 JASPAR yes 63703028
chr5 79479261 79479271 ELK3 JASPAR yes 63703029
chr5 79479261 79479271 ERF JASPAR yes 63703030
chr5 79479261 79479271 ERG JASPAR yes 63703031
chr5 79479261 79479271 ETS1 JASPAR yes 63703032
chr5 79479261 79479271 ETV1 JASPAR yes 63703033
chr5 79479261 79479271 ETV3 JASPAR yes 63703034
chr5 79479261 79479271 ETV4 JASPAR yes 63703035
chr5 79479261 79479271 ETV6 JASPAR yes 63703036
chr5 79479261 79479271 FEV JASPAR yes 63703037
chr5 79479261 79479271 FLI1 JASPAR yes 63703038
chr5 79479261 79479271 GABPA JASPAR yes 63703039
chr5 79479261 79479272 ELK4 JASPAR yes 63703040
chr5 79479261 79479272 FLI1 JASPAR yes 63703041
chr5 79479262 79479270 EHF JASPAR yes 63703042
chr5 79479262 79479270 FEV JASPAR yes 63703043
chr5 79479263 79479270 SPI1 JASPAR yes 63703044
Genes associated with rs553212524[chr5:79479266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More