EnhancerDB
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  3. rs553217014[chr17:80821410]
Enhancers that have rs553217014[chr17:80821410]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80814305 80837217 enh17458
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Breast Uterus Thyroid Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs553217014[chr17:80821410]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80821282 80821682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21800855
chr17 80821282 80821682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108312964
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 21800856
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 108312965
chr17 80821327 80822694 ZNF143 GTRD no Epithelial (MCF-7) 108312966
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 21800857
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 108312967
chr17 80821355 80822683 ZNF143 GTRD no Epithelial (MCF-7) 108312968
chr17 80821404 80822582 TCF7L2 GTRD no Colon (HCT116) 21800858
chr17 80821404 80822582 TCF7L2 GTRD no Colon (HCT116) 108312969
chr17 80821404 80822582 TCF7L2 GTRD no Colon (HCT116) 108312970
chr17 80821409 80821419 GCM2 JASPAR yes 56389132
chr17 80821409 80821420 GCM1 JASPAR yes 56389133
Genes associated with rs553217014[chr17:80821410], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More