EnhancerDB
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  3. rs553226070[chr1:167774952]
Enhancers that have rs553226070[chr1:167774952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 167759045 167777775 enh27199
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553226070[chr1:167774952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 167774679 167775007 ZNF274 GTRD no Cervix (HeLa-S3) 21347335
chr1 167774682 167775563 ZBTB33 GTRD no Brain (SK-N-SH) 21347336
chr1 167774716 167775661 ZBTB33 GTRD no Brain (SK-N-SH) 21347337
chr1 167774941 167774954 NR2F1 JASPAR yes 32895401
chr1 167774943 167774957 RXRB JASPAR yes 32895402
chr1 167774952 167774957 GATA2 JASPAR yes 32895404
Genes associated with rs553226070[chr1:167774952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More