EnhancerDB
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  3. rs553241614[chr17:56009490]
Enhancers that have rs553241614[chr17:56009490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553241614[chr17:56009490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56009471 56009491 RREB1 JASPAR yes 55001072
chr17 56009473 56009493 RREB1 JASPAR yes 55001074
chr17 56009475 56009495 RREB1 JASPAR yes 55001075
chr17 56009477 56009497 RREB1 JASPAR yes 55001076
Genes associated with rs553241614[chr17:56009490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More