EnhancerDB
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  3. rs553249893[chr16:25006777]
Enhancers that have rs553249893[chr16:25006777]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553249893[chr16:25006777]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25005141 25007271 ZNF274 GTRD no Bone Marrow (K562) 21699251
chr16 25005141 25007271 ZNF274 GTRD no Bone Marrow (K562) 108189409
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 21699254
chr16 25005307 25007427 TEF1 GTRD no Bone (Osteoblast) 108189413
chr16 25005637 25007296 ZNF143 GTRD no Epithelial (MCF-7) 21699285
chr16 25005637 25007296 ZNF143 GTRD no Epithelial (MCF-7) 108189453
chr16 25005667 25007325 ZNF143 GTRD no Epithelial (MCF-7) 21699293
chr16 25005667 25007325 ZNF143 GTRD no Epithelial (MCF-7) 108189462
chr16 25005771 25007289 ZNF143 GTRD no Epithelial (MCF-7) 21699301
chr16 25005771 25007289 ZNF143 GTRD no Epithelial (MCF-7) 108189470
chr16 25005799 25007095 ZNF274 GTRD no Cervix (HeLa-S3) 21699305
chr16 25005799 25007095 ZNF274 GTRD no Cervix (HeLa-S3) 108189475
chr16 25006756 25006777 ZNF263 JASPAR yes 10093602
chr16 25006758 25006779 ZNF263 JASPAR yes 10093603
chr16 25006759 25006780 ZNF263 JASPAR yes 10093604
chr16 25006761 25006782 ZNF263 JASPAR yes 10093605
chr16 25006765 25006786 IRF1 JASPAR yes 10093607
chr16 25006767 25006788 ZNF263 JASPAR yes 10093608
chr16 25006768 25006789 ZNF263 JASPAR yes 10093609
chr16 25006769 25006784 PRDM1 JASPAR yes 10093611
chr16 25006770 25006791 ZNF263 JASPAR yes 10093612
chr16 25006777 25006798 ZNF263 JASPAR yes 10093613
Genes associated with rs553249893[chr16:25006777], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More