EnhancerDB
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  3. rs553278818[chr2:220555931]
Enhancers that have rs553278818[chr2:220555931]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 220543985 220559335 enh6158
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs553278818[chr2:220555931]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 220555923 220555938 TFAP2A JASPAR yes 81046879
chr2 220555923 220555938 TFAP2C JASPAR yes 81046880
chr2 220555925 220555940 TFAP2A JASPAR yes 81046881
chr2 220555925 220555940 TFAP2C JASPAR yes 81046882
chr2 220555927 220555936 TFAP2A JASPAR yes 81046883
Genes associated with rs553278818[chr2:220555931], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More