EnhancerDB
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  3. rs553297784[chr3:58022148]
Enhancers that have rs553297784[chr3:58022148]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553297784[chr3:58022148]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58022134 58022152 NFYA JASPAR yes 2667377
chr3 58022137 58022153 NFYA JASPAR yes 2667378
chr3 58022140 58022155 NFYB JASPAR yes 2667379
chr3 58022146 58022150 ESR1 TRANSFAC yes 2667381
Genes associated with rs553297784[chr3:58022148], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More