EnhancerDB
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  3. rs553300735[chr6:44025055]
Enhancers that have rs553300735[chr6:44025055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553300735[chr6:44025055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44025042 44025059 RARA JASPAR yes 101818566
chr6 44025047 44025058 USF1 JASPAR yes 101818567
chr6 44025047 44025058 USF2 JASPAR yes 101818568
chr6 44025050 44025067 RXRA JASPAR yes 101818569
chr6 44025053 44025063 ELK1 JASPAR yes 101818570
chr6 44025054 44025065 ETV2 JASPAR yes 101818571
chr6 44025055 44025064 ELK4 JASPAR yes 101818572
chr6 44025055 44025065 ELK1 JASPAR yes 101818573
chr6 44025055 44025065 ELK3 JASPAR yes 101818574
chr6 44025055 44025065 ERF JASPAR yes 101818575
chr6 44025055 44025065 ERG JASPAR yes 101818576
chr6 44025055 44025065 ETS1 JASPAR yes 101818577
chr6 44025055 44025065 ETV1 JASPAR yes 101818578
chr6 44025055 44025065 ETV3 JASPAR yes 101818579
chr6 44025055 44025065 ETV4 JASPAR yes 101818580
chr6 44025055 44025065 ETV5 JASPAR yes 101818581
chr6 44025055 44025065 FEV JASPAR yes 101818582
chr6 44025055 44025065 FLI1 JASPAR yes 101818583
chr6 44025055 44025065 GABPA JASPAR yes 101818584
chr6 44025055 44025066 ELK4 JASPAR yes 101818585
Genes associated with rs553300735[chr6:44025055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More