EnhancerDB
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  3. rs553334436[chr1:27760045]
Enhancers that have rs553334436[chr1:27760045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553334436[chr1:27760045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27760039 27760052 POU2F2 JASPAR yes 27693078
chr1 27760039 27760053 POU1F1 JASPAR yes 27693079
chr1 27760040 27760052 POU3F1 JASPAR yes 27693080
chr1 27760040 27760052 POU3F2 JASPAR yes 27693081
chr1 27760040 27760053 POU3F3 JASPAR yes 27693082
chr1 27760041 27760045 YY1 TRANSFAC yes 27693083
chr1 27760041 27760053 POU2F1 JASPAR yes 27693084
chr1 27760042 27760049 POU2F1 TRANSFAC yes 27693085
chr1 27760042 27760049 POU2F2C TRANSFAC yes 27693086
chr1 27760042 27760049 POU2F2 TRANSFAC yes 27693087
chr1 27760042 27760050 POU2F1 TRANSFAC yes 27693088
chr1 27760042 27760051 POU3F4 JASPAR yes 27693089
chr1 27760042 27760051 POU5F1B JASPAR yes 27693090
chr1 27760042 27760056 IRF7 JASPAR yes 27693091
Genes associated with rs553334436[chr1:27760045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More