EnhancerDB
  1. Home
  2. SNP
  3. rs553373235[chr17:785660]
Enhancers that have rs553373235[chr17:785660]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553373235[chr17:785660]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 785650 785660 SP1 JASPAR yes 52636431
chr17 785650 785671 ZNF263 JASPAR yes 52636432
chr17 785651 785672 ZNF263 JASPAR yes 52636433
chr17 785654 785671 RXRA JASPAR yes 52636434
Genes associated with rs553373235[chr17:785660], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More