EnhancerDB
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  3. rs553417779[chr3:185468406]
Enhancers that have rs553417779[chr3:185468406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553417779[chr3:185468406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185468405 185468409 NFE TRANSFAC yes 8283935
chr3 185468406 185468411 GATA2 JASPAR yes 8283936
Genes associated with rs553417779[chr3:185468406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More