EnhancerDB
  1. Home
  2. SNP
  3. rs553425672[chr12:122604774]
Enhancers that have rs553425672[chr12:122604774]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553425672[chr12:122604774]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122604753 122604774 IRF1 JASPAR yes 124268801
chr12 122604757 122604778 ZNF263 JASPAR yes 124268804
chr12 122604758 122604779 IRF1 JASPAR yes 124268806
chr12 122604760 122604775 PRDM1 JASPAR yes 124268807
chr12 122604762 122604783 ZNF263 JASPAR yes 124268808
chr12 122604764 122604785 IRF1 JASPAR yes 124268809
chr12 122604765 122604780 FOXP1 JASPAR yes 124268810
chr12 122604765 122604786 IRF1 JASPAR yes 124268811
chr12 122604765 122604786 ZNF263 JASPAR yes 124268812
chr12 122604766 122604781 STAT2 JASPAR yes 124268813
chr12 122604766 122604787 ZNF263 JASPAR yes 124268814
chr12 122604770 122604785 FOXP1 JASPAR yes 124268815
Genes associated with rs553425672[chr12:122604774], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More