EnhancerDB
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  3. rs553430189[chr1:25097869]
Enhancers that have rs553430189[chr1:25097869]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553430189[chr1:25097869]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25097859 25097870 FOSL2 JASPAR yes 27529806
chr1 25097859 25097870 JUNB JASPAR yes 27529807
chr1 25097859 25097873 JUN JASPAR yes 27529808
chr1 25097868 25097879 HOXA10 JASPAR yes 27529810
chr1 25097869 25097879 ALX3 JASPAR yes 27529811
chr1 25097869 25097879 GSX1 JASPAR yes 27529812
chr1 25097869 25097879 GSX2 JASPAR yes 27529813
chr1 25097869 25097879 HOXB2 JASPAR yes 27529814
chr1 25097869 25097879 HOXB3 JASPAR yes 27529815
chr1 25097869 25097879 MEOX2 JASPAR yes 27529816
chr1 25097869 25097879 MIXL1 JASPAR yes 27529817
chr1 25097869 25097879 MNX1 JASPAR yes 27529818
Genes associated with rs553430189[chr1:25097869], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More