EnhancerDB
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  3. rs553444017[chr3:58017055]
Enhancers that have rs553444017[chr3:58017055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553444017[chr3:58017055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58017050 58017059 SP1 TRANSFAC yes 2666563
chr3 58017051 58017059 SP1 TRANSFAC yes 2666564
chr3 58017051 58017061 SP1 JASPAR yes 2666565
Genes associated with rs553444017[chr3:58017055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More