EnhancerDB
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  3. rs553448619[chr10:21654882]
Enhancers that have rs553448619[chr10:21654882]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553448619[chr10:21654882]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21654871 21654885 ONECUT3 JASPAR yes 125902199
chr10 21654873 21654884 PHOX2A JASPAR yes 125902200
chr10 21654873 21654884 PROP1 JASPAR yes 125902201
chr10 21654874 21654884 PAX3 JASPAR yes 125902202
chr10 21654874 21654884 PAX7 JASPAR yes 125902203
chr10 21654876 21654886 GSX1 JASPAR yes 125902204
chr10 21654876 21654886 GSX2 JASPAR yes 125902205
chr10 21654876 21654886 LHX2 JASPAR yes 125902206
chr10 21654876 21654886 LHX6 JASPAR yes 125902207
chr10 21654876 21654886 MNX1 JASPAR yes 125902208
chr10 21654876 21654886 NOTO JASPAR yes 125902209
chr10 21654876 21654886 POU6F1 JASPAR yes 125902210
chr10 21654876 21654886 RAX JASPAR yes 125902211
chr10 21654877 21654885 ISX JASPAR yes 125902212
chr10 21654877 21654885 LMX1A JASPAR yes 125902213
chr10 21654877 21654885 LMX1B JASPAR yes 125902214
chr10 21654877 21654885 NKX6-1 JASPAR yes 125902215
chr10 21654877 21654885 NKX6-2 JASPAR yes 125902216
chr10 21654877 21654885 PRRX1 JASPAR yes 125902217
chr10 21654877 21654885 RAX2 JASPAR yes 125902218
chr10 21654877 21654885 SHOX JASPAR yes 125902219
chr10 21654877 21654885 UNCX JASPAR yes 125902220
chr10 21654877 21654885 VAX1 JASPAR yes 125902221
chr10 21654877 21654890 DUXA JASPAR yes 125902222
chr10 21654878 21654888 PAX3 JASPAR yes 125902223
chr10 21654878 21654888 PAX7 JASPAR yes 125902224
chr10 21654878 21654889 DUX4 JASPAR yes 125902225
chr10 21654878 21654889 PHOX2A JASPAR yes 125902226
chr10 21654878 21654889 PROP1 JASPAR yes 125902227
Genes associated with rs553448619[chr10:21654882], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More