EnhancerDB
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  3. rs553453739[chr10:21660359]
Enhancers that have rs553453739[chr10:21660359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553453739[chr10:21660359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21660319 21660942 TCF7L2 GTRD no Colon (HCT116) 21421069
chr10 21660338 21660359 IRF1 JASPAR yes 125903238
chr10 21660340 21660361 ZNF263 JASPAR yes 125903239
chr10 21660343 21660364 ZNF263 JASPAR yes 125903242
chr10 21660344 21660359 FOXP1 JASPAR yes 125903243
chr10 21660344 21660365 IRF1 JASPAR yes 125903244
chr10 21660345 21660360 FOXP1 JASPAR yes 125903245
chr10 21660345 21660366 IRF1 JASPAR yes 125903246
chr10 21660346 21660361 FOXP1 JASPAR yes 125903247
chr10 21660346 21660367 IRF1 JASPAR yes 125903248
chr10 21660347 21660362 FOXP1 JASPAR yes 125903249
chr10 21660347 21660368 IRF1 JASPAR yes 125903250
chr10 21660348 21660363 FOXP1 JASPAR yes 125903251
chr10 21660350 21660365 FOXP1 JASPAR yes 125903252
chr10 21660351 21660372 IRF1 JASPAR yes 125903253
chr10 21660352 21660367 FOXP1 JASPAR yes 125903254
chr10 21660353 21660374 IRF1 JASPAR yes 125903255
chr10 21660355 21660369 STAT1 JASPAR yes 125903256
chr10 21660355 21660370 PRDM1 JASPAR yes 125903257
chr10 21660355 21660370 STAT2 JASPAR yes 125903258
chr10 21660357 21660378 IRF1 JASPAR yes 125903259
chr10 21660359 21660374 IRF9 JASPAR yes 125903260
chr10 21660359 21660380 ZNF263 JASPAR yes 125903261
Genes associated with rs553453739[chr10:21660359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More