EnhancerDB
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  3. rs553455330[chr12:45631213]
Enhancers that have rs553455330[chr12:45631213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 45623065 45632795 enh14662
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553455330[chr12:45631213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 45631199 45631217 IRF2 JASPAR yes 120542019
chr12 45631200 45631221 IRF1 JASPAR yes 120542020
chr12 45631202 45631217 STAT2 JASPAR yes 120542021
chr12 45631203 45631217 STAT1 JASPAR yes 120542022
chr12 45631204 45631216 IRF1 JASPAR yes 120542023
chr12 45631204 45631218 IRF7 JASPAR yes 120542024
chr12 45631204 45631218 IRF8 JASPAR yes 120542025
chr12 45631204 45631219 IRF9 JASPAR yes 120542026
Genes associated with rs553455330[chr12:45631213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More