EnhancerDB
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  3. rs553501239[chr11:12469762]
Enhancers that have rs553501239[chr11:12469762]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12449945 12474246 enh13781
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs553501239[chr11:12469762]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12469748 12469769 ZNF263 JASPAR yes 37448044
chr11 12469755 12469765 SP1 JASPAR yes 37448046
chr11 12469755 12469769 GLIS2 JASPAR yes 37448047
chr11 12469755 12469769 GLIS3 JASPAR yes 37448048
chr11 12469755 12469776 ZNF263 JASPAR yes 37448049
chr11 12469757 12469762 SP1 TRANSFAC yes 37448050
chr11 12469758 12469763 SP1 TRANSFAC yes 37448051
chr11 12469758 12469764 SP1 TRANSFAC yes 37448052
chr11 12469762 12469780 ESR2 JASPAR yes 37448053
Genes associated with rs553501239[chr11:12469762], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More