EnhancerDB
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  3. rs553522806[chr10:95196331]
Enhancers that have rs553522806[chr10:95196331]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 95190385 95209175 enh13411
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr10 95195782 95196689 vista8353
VISTA
Transcript factors that have rs553522806[chr10:95196331]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 95195709 95196345 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107931688
chr10 95195999 95196387 SOX2 GTRD no Neural Stem Cells (H9) 21450825
chr10 95195999 95196387 SOX2 GTRD no Neural Stem Cells (H9) 107931701
chr10 95196003 95196417 SOX2 GTRD no Neural Stem Cells (H9) 21450826
chr10 95196003 95196417 SOX2 GTRD no Neural Stem Cells (H9) 107931702
chr10 95196290 95196570 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107931703
chr10 95196319 95196333 BATF3 JASPAR yes 21135589
chr10 95196319 95196333 BATF3 JASPAR yes 129210972
Genes associated with rs553522806[chr10:95196331], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More