EnhancerDB
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  3. rs553609076[chr1:10580208]
Enhancers that have rs553609076[chr1:10580208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553609076[chr1:10580208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10580193 10580214 IRF1 JASPAR yes 26720500
chr1 10580196 10580210 SPI1 JASPAR yes 26720501
chr1 10580196 10580217 IRF1 JASPAR yes 26720502
chr1 10580199 10580213 SPI1 JASPAR yes 26720503
chr1 10580199 10580220 IRF1 JASPAR yes 26720504
chr1 10580202 10580217 FOXP1 JASPAR yes 26720505
chr1 10580202 10580223 IRF1 JASPAR yes 26720506
chr1 10580203 10580223 RREB1 JASPAR yes 26720507
chr1 10580203 10580224 IRF1 JASPAR yes 26720508
chr1 10580204 10580219 FOXP1 JASPAR yes 26720509
chr1 10580205 10580220 FOXP1 JASPAR yes 26720510
chr1 10580206 10580221 FOXP1 JASPAR yes 26720511
chr1 10580207 10580222 FOXP1 JASPAR yes 26720512
chr1 10580208 10580223 FOXP1 JASPAR yes 26720513
chr1 10580208 10580229 IRF1 JASPAR yes 26720514
Genes associated with rs553609076[chr1:10580208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More