EnhancerDB
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  3. rs553615825[chr12:53966062]
Enhancers that have rs553615825[chr12:53966062]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs553615825[chr12:53966062]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53966051 53966065 RXRB JASPAR yes 120992635
chr12 53966051 53966065 RXRG JASPAR yes 120992636
chr12 53966051 53966066 HNF4A JASPAR yes 120992637
chr12 53966060 53966064 LFA1 TRANSFAC yes 120992638
Genes associated with rs553615825[chr12:53966062], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More