EnhancerDB
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  3. rs553633355[chr6:16315380]
Enhancers that have rs553633355[chr6:16315380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16314945 16326043 enh8974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553633355[chr6:16315380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16315375 16315389 PAX6 JASPAR yes 100286185
chr6 16315379 16315396 RARA JASPAR yes 100286186
Genes associated with rs553633355[chr6:16315380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More