EnhancerDB
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  3. rs553673267[chr1:227543245]
Enhancers that have rs553673267[chr1:227543245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227541685 227548089 enh12732
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Astrocyte Lung (A549) Stomach Placenta Adrenal Uterus Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs553673267[chr1:227543245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227541781 227543359 ZNF143 GTRD no Epithelial (MCF-7) 21387791
chr1 227541874 227543304 ZBTB33 GTRD no Lung (A549) 21387793
chr1 227542055 227543387 ZBTB33 GTRD no Lung (A549) 21387797
chr1 227542092 227543471 ZBTB33 GTRD no Lung (A549) 21387803
chr1 227542138 227543291 ZNF143 GTRD no Epithelial (MCF-7) 21387807
chr1 227542167 227543317 ZNF143 GTRD no Epithelial (MCF-7) 21387816
chr1 227542190 227543350 ZBTB33 GTRD no Lung (A549) 21387821
chr1 227542208 227543281 ZBTB33 GTRD no Lung (A549) 21387822
chr1 227542276 227543441 ZBTB33 GTRD no Lung (A549) 21387828
chr1 227542420 227543419 ZNF274 GTRD no Cervix (HeLa-S3) 21387849
chr1 227543235 227543250 TFAP2A JASPAR yes 35871782
chr1 227543235 227543250 TFAP2C JASPAR yes 35871783
chr1 227543238 227543249 TFAP2A JASPAR yes 35871784
chr1 227543238 227543249 TFAP2B JASPAR yes 35871785
chr1 227543238 227543249 TFAP2C JASPAR yes 35871786
Genes associated with rs553673267[chr1:227543245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More