EnhancerDB
  1. Home
  2. SNP
  3. rs553692179[chr1:226856774]
Enhancers that have rs553692179[chr1:226856774]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553692179[chr1:226856774]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226856760 226856774 ONECUT2 JASPAR yes 35830291
chr1 226856760 226856774 ONECUT3 JASPAR yes 35830292
chr1 226856766 226856777 CEBPB JASPAR yes 35830295
chr1 226856768 226856784 POU4F2 JASPAR yes 35830296
chr1 226856768 226856784 POU4F3 JASPAR yes 35830297
chr1 226856770 226856784 POU4F1 JASPAR yes 35830298
chr1 226856770 226856785 HNF1A JASPAR yes 35830299
chr1 226856771 226856781 HOXB2 JASPAR yes 35830300
chr1 226856771 226856781 HOXB3 JASPAR yes 35830301
chr1 226856771 226856781 MNX1 JASPAR yes 35830302
chr1 226856771 226856781 POU6F1 JASPAR yes 35830303
chr1 226856771 226856783 HNF1B JASPAR yes 35830304
chr1 226856771 226856784 HNF1B JASPAR yes 35830305
chr1 226856772 226856780 LMX1A JASPAR yes 35830306
chr1 226856772 226856780 LMX1B JASPAR yes 35830307
chr1 226856772 226856780 NKX6-1 JASPAR yes 35830308
chr1 226856772 226856780 NKX6-2 JASPAR yes 35830309
chr1 226856772 226856780 VAX1 JASPAR yes 35830310
chr1 226856772 226856780 VAX2 JASPAR yes 35830311
chr1 226856772 226856780 VSX1 JASPAR yes 35830312
chr1 226856772 226856780 VSX2 JASPAR yes 35830313
Genes associated with rs553692179[chr1:226856774], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More