EnhancerDB
  1. Home
  2. SNP
  3. rs553719464[chr17:78649829]
Enhancers that have rs553719464[chr17:78649829]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs553719464[chr17:78649829]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78649813 78649834 IRF1 JASPAR yes 56266427
chr17 78649815 78649830 IRF9 JASPAR yes 56266428
chr17 78649816 78649830 IRF7 JASPAR yes 56266429
chr17 78649817 78649831 STAT1 JASPAR yes 56266430
chr17 78649817 78649832 PRDM1 JASPAR yes 56266431
chr17 78649817 78649832 STAT2 JASPAR yes 56266432
Genes associated with rs553719464[chr17:78649829], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More