EnhancerDB
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  3. rs553735862[chr6:30768155]
Enhancers that have rs553735862[chr6:30768155]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553735862[chr6:30768155]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30768143 30768163 RREB1 JASPAR yes 101051841
chr6 30768148 30768168 RREB1 JASPAR yes 101051843
chr6 30768149 30768164 IRF9 JASPAR yes 101051844
chr6 30768153 30768173 RREB1 JASPAR yes 101051845
chr6 30768154 30768175 IRF1 JASPAR yes 101051846
chr6 30768155 30768170 FOXP1 JASPAR yes 101051847
chr6 30768155 30768175 RREB1 JASPAR yes 101051848
Genes associated with rs553735862[chr6:30768155], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More