EnhancerDB
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  3. rs553765079[chr1:236082820]
Enhancers that have rs553765079[chr1:236082820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236062005 236089295 enh12805
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs553765079[chr1:236082820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236082478 236082939 ZNF274 GTRD no Bone Marrow (K562) 107886247
chr1 236082551 236082843 ZNF274 GTRD no Cervix (HeLa-S3) 21403927
chr1 236082551 236082843 ZNF274 GTRD no Cervix (HeLa-S3) 107886248
chr1 236082553 236082878 ZNF274 GTRD no Bone Marrow (K562) 107886249
chr1 236082568 236082824 ZNF274 GTRD no Liver (HepG2) 107886250
chr1 236082763 236083099 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21403928
chr1 236082763 236083099 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107886251
chr1 236082804 236082825 ZNF263 JASPAR yes 36388010
chr1 236082805 236082826 ZNF263 JASPAR yes 36388011
chr1 236082807 236082828 ZNF263 JASPAR yes 36388012
chr1 236082812 236082833 IRF1 JASPAR yes 36388013
chr1 236082818 236082839 IRF1 JASPAR yes 36388014
chr1 236082820 236082835 PRDM1 JASPAR yes 36388015
Genes associated with rs553765079[chr1:236082820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More