EnhancerDB
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  3. rs553788942[chr7:100752472]
Enhancers that have rs553788942[chr7:100752472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 100736785 100765274 enh24375
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr7 100752309 100752636 vista56733
VISTA
Transcript factors that have rs553788942[chr7:100752472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 100752464 100752476 TFAP2A JASPAR yes 16753045
chr7 100752464 100752476 TFAP2B JASPAR yes 16753046
chr7 100752464 100752476 TFAP2C JASPAR yes 16753047
chr7 100752464 100752476 TFAP2A JASPAR yes 26103898
chr7 100752464 100752476 TFAP2B JASPAR yes 26103899
chr7 100752464 100752476 TFAP2C JASPAR yes 26103900
chr7 100752468 100752479 E2F6 JASPAR yes 16753048
chr7 100752468 100752479 E2F6 JASPAR yes 26103901
chr7 100752468 100752481 SMAD2 JASPAR yes 16753049
chr7 100752468 100752481 SMAD2 JASPAR yes 26103902
Genes associated with rs553788942[chr7:100752472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More