EnhancerDB
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  3. rs553790031[chr1:39630320]
Enhancers that have rs553790031[chr1:39630320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39628825 39647095 enh11760
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 39629409 39631707 vista40
VISTA
Transcript factors that have rs553790031[chr1:39630320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39630314 39630325 FOXH1 JASPAR yes 28261073
chr1 39630314 39630325 FOXH1 JASPAR yes 71129108
chr1 39630318 39630323 NFY TRANSFAC yes 28261074
chr1 39630318 39630323 NFY TRANSFAC yes 71129109
Genes associated with rs553790031[chr1:39630320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More