EnhancerDB
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  3. rs553804107[chr12:106521069]
Enhancers that have rs553804107[chr12:106521069]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106512365 106532655 enh29959
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs553804107[chr12:106521069]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106521058 106521074 GLIS1 JASPAR yes 123492511
chr12 106521059 106521073 GLIS2 JASPAR yes 123492512
chr12 106521059 106521073 GLIS3 JASPAR yes 123492513
chr12 106521068 106521084 RFX2 JASPAR yes 123492514
chr12 106521068 106521084 RFX3 JASPAR yes 123492515
chr12 106521068 106521084 RFX4 JASPAR yes 123492516
Genes associated with rs553804107[chr12:106521069], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More