EnhancerDB
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  3. rs553815775[chr1:182935979]
Enhancers that have rs553815775[chr1:182935979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182929285 182941635 enh12443
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Uterus Lung (PC-9) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553815775[chr1:182935979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182935967 182935979 FOXC2 JASPAR yes 33643223
chr1 182935977 182935987 ALX3 JASPAR yes 33643225
chr1 182935977 182935987 GSX2 JASPAR yes 33643226
chr1 182935977 182935987 MIXL1 JASPAR yes 33643227
chr1 182935977 182935987 MNX1 JASPAR yes 33643228
chr1 182935978 182935986 ISX JASPAR yes 33643229
chr1 182935978 182935986 LMX1A JASPAR yes 33643230
chr1 182935978 182935986 LMX1B JASPAR yes 33643231
chr1 182935978 182935986 NKX6-1 JASPAR yes 33643232
chr1 182935978 182935986 NKX6-2 JASPAR yes 33643233
chr1 182935978 182935986 PRRX1 JASPAR yes 33643234
chr1 182935978 182935986 RAX2 JASPAR yes 33643235
chr1 182935978 182935986 SHOX JASPAR yes 33643236
chr1 182935978 182935986 UNCX JASPAR yes 33643237
chr1 182935978 182935986 VAX1 JASPAR yes 33643238
Genes associated with rs553815775[chr1:182935979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More