EnhancerDB
  1. Home
  2. SNP
  3. rs553836598[chr12:46844286]
Enhancers that have rs553836598[chr12:46844286]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553836598[chr12:46844286]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46843803 46844313 ZNF143 GTRD no Epithelial (MCF-7) 21541718
chr12 46843937 46844474 ZNF143 GTRD no Epithelial (MCF-7) 21541719
chr12 46844179 46844643 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21541721
chr12 46844215 46844459 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541722
chr12 46844221 46844591 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21541723
chr12 46844231 46844601 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541724
chr12 46844258 46844634 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21541725
Genes associated with rs553836598[chr12:46844286], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More