EnhancerDB
  1. Home
  2. SNP
  3. rs553842624[chr1:181072177]
Enhancers that have rs553842624[chr1:181072177]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553842624[chr1:181072177]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181072048 181072312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21354424
chr1 181072165 181072186 IRF1 JASPAR yes 33552993
chr1 181072167 181072182 IRF9 JASPAR yes 33552994
chr1 181072168 181072182 IRF7 JASPAR yes 33552995
chr1 181072168 181072182 IRF8 JASPAR yes 33552996
chr1 181072169 181072183 STAT1 JASPAR yes 33552997
chr1 181072169 181072184 PRDM1 JASPAR yes 33552998
chr1 181072169 181072184 STAT2 JASPAR yes 33552999
chr1 181072169 181072187 IRF2 JASPAR yes 33553000
chr1 181072170 181072182 IRF1 JASPAR yes 33553001
Genes associated with rs553842624[chr1:181072177], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More