EnhancerDB
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  3. rs553864325[chr17:57844484]
Enhancers that have rs553864325[chr17:57844484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553864325[chr17:57844484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57844476 57844487 RUNX1 JASPAR yes 55079332
chr17 57844478 57844499 IRF1 JASPAR yes 55079333
chr17 57844480 57844495 STAT2 JASPAR yes 55079334
chr17 57844483 57844498 FOXP1 JASPAR yes 55079335
chr17 57844484 57844499 FOXP1 JASPAR yes 55079336
Genes associated with rs553864325[chr17:57844484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More