EnhancerDB
  1. Home
  2. SNP
  3. rs553873344[chr1:235136413]
Enhancers that have rs553873344[chr1:235136413]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs553873344[chr1:235136413]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235135978 235136714 ZBTB33 GTRD no Brain (SK-N-SH) 21402900
chr1 235136135 235136539 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402902
chr1 235136161 235136551 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402903
chr1 235136188 235136558 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402904
chr1 235136220 235136500 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402905
chr1 235136255 235136453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402906
chr1 235136392 235136413 ZNF263 JASPAR yes 36340459
chr1 235136408 235136413 GATA1 TRANSFAC yes 36340463
Genes associated with rs553873344[chr1:235136413], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More