EnhancerDB
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  3. rs553906871[chr16:11719150]
Enhancers that have rs553906871[chr16:11719150]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11694149 11728755 enh16539
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr16 11718451 11719196 vista21889
VISTA
Transcript factors that have rs553906871[chr16:11719150]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11718458 11719182 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21691236
chr16 11718458 11719182 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108182320
chr16 11718913 11720285 ZNF274 GTRD no Liver (HepG2) 108182326
chr16 11719118 11719465 ZNF274 GTRD no Liver (HepG2) 108182327
chr16 11719144 11719163 PAX5 JASPAR yes 9527280
chr16 11719144 11719163 PAX5 JASPAR yes 49343100
chr16 11719148 11719159 NFE2L2 JASPAR yes 9527281
chr16 11719148 11719159 NFE2L2 JASPAR yes 49343101
Genes associated with rs553906871[chr16:11719150], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More