EnhancerDB
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  3. rs553940651[chr2:37893956]
Enhancers that have rs553940651[chr2:37893956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37873616 37895683 enh5417
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Heart
chr2 37893644 37893973 vista31044
VISTA
Transcript factors that have rs553940651[chr2:37893956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37893950 37893971 IRF1 JASPAR yes 22034829
chr2 37893950 37893971 IRF1 JASPAR yes 73073075
chr2 37893955 37893970 FOXP1 JASPAR yes 22034830
chr2 37893955 37893970 FOXP1 JASPAR yes 73073076
chr2 37893956 37893971 FOXP1 JASPAR yes 22034831
chr2 37893956 37893971 FOXP1 JASPAR yes 73073077
Genes associated with rs553940651[chr2:37893956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More