EnhancerDB
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  3. rs553941385[chr17:43367305]
Enhancers that have rs553941385[chr17:43367305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43363305 43400878 enh4428
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553941385[chr17:43367305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43366625 43367514 TCF7L2 GTRD no Colon (HCT116) 21763787
chr17 43366652 43370488 ZNF274 GTRD no Blood (GM12878) 21763788
chr17 43366660 43370501 ZNF274 GTRD no Liver (HepG2) 21763789
chr17 43366695 43369600 ZNF274 GTRD no Blood (GM12878) 21763791
chr17 43366712 43368946 TCF7L2 GTRD no Colon (HCT116) 21763792
chr17 43366878 43368965 ZNF274 GTRD no Bone Marrow (K562) 21763793
chr17 43366904 43369658 TCF7L2 GTRD no Colon (HCT116) 21763794
chr17 43366944 43369466 ZNF143 GTRD no Epithelial (MCF-7) 21763795
chr17 43366949 43369794 ZNF274 GTRD no Blood (GM12878) 21763796
chr17 43367065 43367522 TCF7L2 GTRD no Colon (HCT116) 21763797
chr17 43367073 43368673 ZNF274 GTRD no Blood (GM12878) 21763798
chr17 43367081 43370470 ZNF274 GTRD no Blood (GM12878) 21763799
chr17 43367103 43370279 ZNF274 GTRD no Blood (GM12878) 21763800
chr17 43367175 43367513 ZNF143 GTRD no Epithelial (MCF-7) 21763801
chr17 43367185 43370159 ZNF274 GTRD no Blood (GM12878) 21763802
chr17 43367220 43368617 ZNF274 GTRD no Cervix (HeLa-S3) 21763803
chr17 43367227 43368551 ZNF274 GTRD no Bone Marrow (K562) 21763804
chr17 43367230 43368607 ZNF274 GTRD no Cervix (HeLa-S3) 21763805
chr17 43367244 43370197 ZNF274 GTRD no Blood (GM12878) 21763806
chr17 43367267 43369131 TCF7L2 GTRD no Colon (HCT116) 21763807
chr17 43367276 43370195 ZNF274 GTRD no Blood (GM12878) 21763808
chr17 43367280 43370914 ZNF274 GTRD no Liver (HepG2) 21763809
chr17 43367285 43369507 ZBTB33 GTRD no Brain (SK-N-SH) 21763810
chr17 43367292 43367311 RFX2 JASPAR yes 54439922
chr17 43367294 43368502 TCF7L2 GTRD no Colon (HCT116) 21763811
chr17 43367294 43369726 ZNF274 GTRD no Blood (GM12878) 21763812
chr17 43367297 43368476 ZNF274 GTRD no Cervix (HeLa-S3) 21763813
chr17 43367302 43369782 ZNF274 GTRD no Liver (HepG2) 21763814
chr17 43367305 43367310 ETS2 TRANSFAC yes 54439924
Genes associated with rs553941385[chr17:43367305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More