EnhancerDB
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  3. rs553948589[chr1:10128426]
Enhancers that have rs553948589[chr1:10128426]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10113864 10131352 enh11492
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553948589[chr1:10128426]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10128407 10128428 IRF1 JASPAR yes 26699543
chr1 10128412 10128427 FOXP1 JASPAR yes 26699546
chr1 10128413 10128428 FOXP1 JASPAR yes 26699547
Genes associated with rs553948589[chr1:10128426], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More