EnhancerDB
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  3. rs553950788[chr5:14180580]
Enhancers that have rs553950788[chr5:14180580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14142745 14193315 enh22052
Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553950788[chr5:14180580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14180574 14180591 BCL6B JASPAR yes 61020003
chr5 14180576 14180582 LEF1 TRANSFAC yes 61020004
chr5 14180576 14180582 SOX10 JASPAR yes 61020005
Genes associated with rs553950788[chr5:14180580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More