EnhancerDB
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  3. rs553970784[chr17:80513619]
Enhancers that have rs553970784[chr17:80513619]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553970784[chr17:80513619]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80513599 80513620 IRF1 JASPAR yes 56374399
chr17 80513604 80513619 FOXP1 JASPAR yes 56374404
chr17 80513604 80513625 IRF1 JASPAR yes 56374405
chr17 80513605 80513620 FOXP1 JASPAR yes 56374406
Genes associated with rs553970784[chr17:80513619], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More