EnhancerDB
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  3. rs553989946[chr11:122582485]
Enhancers that have rs553989946[chr11:122582485]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553989946[chr11:122582485]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122582477 122582486 PITX3 JASPAR yes 42022951
chr11 122582478 122582486 OTX2 JASPAR yes 42022952
Genes associated with rs553989946[chr11:122582485], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More