EnhancerDB
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  3. rs554010328[chr16:85238678]
Enhancers that have rs554010328[chr16:85238678]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554010328[chr16:85238678]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85231788 85239840 TCF7L2 GTRD no Colon (HCT116) 21720868
chr16 85234078 85238980 TCF7L2 GTRD no Colon (HCT116) 21720936
chr16 85237690 85239823 TCF7L2 GTRD no Colon (HCT116) 21721104
chr16 85237839 85238837 ZNF143 GTRD no Epithelial (MCF-7) 21721106
chr16 85237850 85238867 ZNF143 GTRD no Epithelial (MCF-7) 21721107
chr16 85237856 85239829 ZNF143 GTRD no Epithelial (MCF-7) 21721108
chr16 85237875 85238831 ZNF143 GTRD no Epithelial (MCF-7) 21721109
chr16 85237895 85238910 ZNF143 GTRD no Epithelial (MCF-7) 21721111
chr16 85237912 85238991 ZNF274 GTRD no Bone Marrow (K562) 21721113
chr16 85237959 85238869 TCF7L2 GTRD no Colon (HCT116) 21721114
chr16 85238003 85239142 TCF7L2 GTRD no Colon (HCT116) 21721115
chr16 85238092 85238835 ZNF274 GTRD no Bone Marrow (K562) 21721116
chr16 85238137 85238865 ZNF274 GTRD no Bone Marrow (K562) 21721117
chr16 85238143 85239039 ZNF274 GTRD no Bone Marrow (K562) 21721118
chr16 85238275 85238771 ZNF274 GTRD no Bone Marrow (K562) 21721119
chr16 85238283 85238712 ZNF274 GTRD no Liver (HepG2) 21721121
chr16 85238318 85238721 ZNF274 GTRD no Bone Marrow (K562) 21721122
chr16 85238326 85238686 ZNF274 GTRD no Bone Marrow (K562) 21721123
chr16 85238337 85239005 ZNF274 GTRD no Bone Marrow (K562) 21721124
chr16 85238375 85238697 ZNF274 GTRD no Liver (HepG2) 21721125
chr16 85238380 85238700 ZNF274 GTRD no Bone Marrow (K562) 21721126
chr16 85238394 85238685 ZNF274 GTRD no Cervix (HeLa-S3) 21721127
chr16 85238394 85238716 ZNF274 GTRD no Bone Marrow (K562) 21721128
Genes associated with rs554010328[chr16:85238678], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More