EnhancerDB
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  3. rs554032488[chr17:57845546]
Enhancers that have rs554032488[chr17:57845546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs554032488[chr17:57845546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57845536 57845550 RORA JASPAR yes 55079542
chr17 57845539 57845549 RORA JASPAR yes 55079543
chr17 57845540 57845553 NR2F1 JASPAR yes 55079544
chr17 57845544 57845548 ESR1 TRANSFAC yes 55079545
Genes associated with rs554032488[chr17:57845546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More